A0A0D0DN24 protein (Paxillus rubicundulus) - STRING interaction network

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gene neighborhood

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Score

A0A0D0DN24

Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence. (162 aa)

Predicted Functional Partners:

A0A0D0DXP9

0.995

A0A0D0EA24

0.995

A0A0D0E7K5

0.992

A0A0D0DKR6

0.991

A0A0D0DY50

0.986

A0A0D0EAI9

0.986

A0A0D0D937

0.985

A0A0D0DMQ2

0.982

LSM5

0.981

A0A0D0E330

0.977

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D0D937	A0A0D0DKR6	A0A0D0D937	A0A0D0DKR6	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.933
A0A0D0D937	A0A0D0DMQ2	A0A0D0D937	A0A0D0DMQ2	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.937
A0A0D0D937	A0A0D0DN24	A0A0D0D937	A0A0D0DN24	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence.	0.985
A0A0D0D937	A0A0D0DXP9	A0A0D0D937	A0A0D0DXP9	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Small nuclear ribonucleoprotein Sm D2.	0.983
A0A0D0D937	A0A0D0DY50	A0A0D0D937	A0A0D0DY50	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Small nuclear ribonucleoprotein G.	0.996
A0A0D0D937	A0A0D0E330	A0A0D0D937	A0A0D0E330	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_233, whole genome shotgun sequence.	0.925
A0A0D0D937	A0A0D0E7K5	A0A0D0D937	A0A0D0E7K5	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Small nuclear ribonucleoprotein Sm D3.	0.980
A0A0D0D937	A0A0D0EA24	A0A0D0D937	A0A0D0EA24	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.995
A0A0D0D937	A0A0D0EAI9	A0A0D0D937	A0A0D0EAI9	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence.	0.992
A0A0D0D937	LSM5	A0A0D0D937	A0A0D0DXE7	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.944
A0A0D0DKR6	A0A0D0D937	A0A0D0DKR6	A0A0D0D937	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	0.933
A0A0D0DKR6	A0A0D0DMQ2	A0A0D0DKR6	A0A0D0DMQ2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.908
A0A0D0DKR6	A0A0D0DN24	A0A0D0DKR6	A0A0D0DN24	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence.	0.991
A0A0D0DKR6	A0A0D0DXP9	A0A0D0DKR6	A0A0D0DXP9	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A0D0DKR6	A0A0D0DY50	A0A0D0DKR6	A0A0D0DY50	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein G.	0.988
A0A0D0DKR6	A0A0D0E330	A0A0D0DKR6	A0A0D0E330	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_233, whole genome shotgun sequence.	0.999
A0A0D0DKR6	A0A0D0E7K5	A0A0D0DKR6	A0A0D0E7K5	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.982
A0A0D0DKR6	A0A0D0EA24	A0A0D0DKR6	A0A0D0EA24	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.993
A0A0D0DKR6	A0A0D0EAI9	A0A0D0DKR6	A0A0D0EAI9	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence.	0.969
A0A0D0DKR6	LSM5	A0A0D0DKR6	A0A0D0DXE7	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999