STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DNA9Unplaced genomic scaffold scaffold_1293, whole genome shotgun sequence. (1444 aa)    
Predicted Functional Partners:
A0A0D0D8V6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.909
A0A0D0BQC1
Unplaced genomic scaffold scaffold_4645, whole genome shotgun sequence.
   
 0.904
A0A0D0BZU6
Unplaced genomic scaffold scaffold_2575, whole genome shotgun sequence.
   
 0.904
A0A0D0DCA3
Unplaced genomic scaffold scaffold_1815, whole genome shotgun sequence.
   
 0.904
A0A0D0DJ27
Unplaced genomic scaffold scaffold_611, whole genome shotgun sequence.
   
 0.904
A0A0D0DT66
Unplaced genomic scaffold scaffold_139, whole genome shotgun sequence.
   
 0.904
A0A0D0DT61
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.894
A0A0D0E3B2
Unplaced genomic scaffold scaffold_565, whole genome shotgun sequence.
   
 0.882
A0A0D0DFJ5
Unplaced genomic scaffold scaffold_163, whole genome shotgun sequence.
    
 0.881
A0A0D0DU92
Unplaced genomic scaffold scaffold_98, whole genome shotgun sequence.
    
 0.877
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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