A0A0D0DNN3 protein (Paxillus rubicundulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0D0DNN3

Unplaced genomic scaffold scaffold_9, whole genome shotgun sequence. (220 aa)

Predicted Functional Partners:

A0A0D0DNQ9

0.999

A0A0D0D913

0.998

A0A0D0E855

0.997

A0A0D0DPM2

0.996

A0A0D0DTU2

0.996

A0A0D0EBZ2

0.996

A0A0D0CZQ7

0.995

A0A0D0D937

0.995

A0A0D0E5B2

0.995

A0A0D0E976

0.995

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D0CZQ7	A0A0D0D913	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	0.988
A0A0D0CZQ7	A0A0D0D937	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	0.999
A0A0D0CZQ7	A0A0D0DNN3	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_9, whole genome shotgun sequence.	0.995
A0A0D0CZQ7	A0A0D0DNQ9	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_357, whole genome shotgun sequence.	0.991
A0A0D0CZQ7	A0A0D0DPM2	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.	0.999
A0A0D0CZQ7	A0A0D0DTU2	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_486, whole genome shotgun sequence.	0.999
A0A0D0CZQ7	A0A0D0E5B2	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_160, whole genome shotgun sequence.	0.996
A0A0D0CZQ7	A0A0D0E855	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_272, whole genome shotgun sequence.	0.999
A0A0D0CZQ7	A0A0D0E976	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_216, whole genome shotgun sequence.	0.996
A0A0D0CZQ7	A0A0D0EBZ2	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_69, whole genome shotgun sequence.	0.999
A0A0D0D913	A0A0D0CZQ7	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1024, whole genome shotgun sequence.	0.988
A0A0D0D913	A0A0D0D937	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.	0.985
A0A0D0D913	A0A0D0DNN3	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_9, whole genome shotgun sequence.	0.998
A0A0D0D913	A0A0D0DNQ9	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_357, whole genome shotgun sequence.	0.999
A0A0D0D913	A0A0D0DPM2	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.	0.993
A0A0D0D913	A0A0D0DTU2	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_486, whole genome shotgun sequence.	0.996
A0A0D0D913	A0A0D0E5B2	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_160, whole genome shotgun sequence.	0.998
A0A0D0D913	A0A0D0E855	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_272, whole genome shotgun sequence.	0.996
A0A0D0D913	A0A0D0E976	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_216, whole genome shotgun sequence.	0.995
A0A0D0D913	A0A0D0EBZ2	Unplaced genomic scaffold scaffold_362, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_69, whole genome shotgun sequence.	0.996