STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DNW5Unplaced genomic scaffold scaffold_350, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family. (289 aa)    
Predicted Functional Partners:
A0A0D0D3I9
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.825
A0A0D0DSZ1
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.825
A0A0D0EAD4
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
 
 
 
 0.810
A0A0D0DY49
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
   0.772
A0A0D0DMW2
Unplaced genomic scaffold scaffold_767, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
0.771
A0A0D0DPU3
Unplaced genomic scaffold scaffold_309, whole genome shotgun sequence.
   
 
 0.771
A0A0D0E1E0
Unplaced genomic scaffold scaffold_309, whole genome shotgun sequence.
   
 
 0.771
A0A0D0EC53
Unplaced genomic scaffold scaffold_59, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.771
A0A0D0DL41
Unplaced genomic scaffold scaffold_42, whole genome shotgun sequence.
    
 
 0.754
A0A0D0E3Q0
Unplaced genomic scaffold scaffold_56, whole genome shotgun sequence.
    
 
 0.754
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.