LSM4 protein (Paxillus rubicundulus) - STRING interaction network

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Score

LSM4

U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)

Predicted Functional Partners:

LSM1

0.999

A0A0D0DKR6

0.999

A0A0D0DSM5

0.999

LSM5

0.999

A0A0D0E330

0.999

A0A0D0E4M5

0.999

LSM3

0.999

LSM8

0.998

A0A0D0E6Q5

0.991

A0A0D0DXP9

0.990

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D0DKR6	A0A0D0DSM5	A0A0D0DKR6	A0A0D0DSM5	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	0.999
A0A0D0DKR6	A0A0D0DXP9	A0A0D0DKR6	A0A0D0DXP9	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A0D0DKR6	A0A0D0E330	A0A0D0DKR6	A0A0D0E330	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_233, whole genome shotgun sequence.	0.999
A0A0D0DKR6	A0A0D0E4M5	A0A0D0DKR6	A0A0D0E4M5	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_40, whole genome shotgun sequence.	0.999
A0A0D0DKR6	A0A0D0E6Q5	A0A0D0DKR6	A0A0D0E6Q5	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.	0.962
A0A0D0DKR6	LSM1	A0A0D0DKR6	A0A0D0DCA2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.999
A0A0D0DKR6	LSM3	A0A0D0DKR6	A0A0D0E5P6	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A0D0DKR6	LSM4	A0A0D0DKR6	A0A0D0DPB2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A0D0DKR6	LSM5	A0A0D0DKR6	A0A0D0DXE7	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A0D0DKR6	LSM8	A0A0D0DKR6	A0A0D0E6L4	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A0D0DSM5	A0A0D0DKR6	A0A0D0DSM5	A0A0D0DKR6	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A0D0DSM5	A0A0D0DXP9	A0A0D0DSM5	A0A0D0DXP9	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	Small nuclear ribonucleoprotein Sm D2.	0.995
A0A0D0DSM5	A0A0D0E330	A0A0D0DSM5	A0A0D0E330	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_233, whole genome shotgun sequence.	0.999
A0A0D0DSM5	A0A0D0E4M5	A0A0D0DSM5	A0A0D0E4M5	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_40, whole genome shotgun sequence.	0.999
A0A0D0DSM5	A0A0D0E6Q5	A0A0D0DSM5	A0A0D0E6Q5	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.	0.946
A0A0D0DSM5	LSM1	A0A0D0DSM5	A0A0D0DCA2	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.999
A0A0D0DSM5	LSM3	A0A0D0DSM5	A0A0D0E5P6	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A0D0DSM5	LSM4	A0A0D0DSM5	A0A0D0DPB2	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A0D0DSM5	LSM5	A0A0D0DSM5	A0A0D0DXE7	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A0D0DSM5	LSM8	A0A0D0DSM5	A0A0D0E6L4	Unplaced genomic scaffold scaffold_592, whole genome shotgun sequence.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999