STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DQY1Unplaced genomic scaffold scaffold_241, whole genome shotgun sequence. (224 aa)    
Predicted Functional Partners:
A0A0D0E2M2
Unplaced genomic scaffold scaffold_256, whole genome shotgun sequence.
   
 0.951
A0A0D0DHT5
Unplaced genomic scaffold scaffold_96, whole genome shotgun sequence; Belongs to the heat shock protein 70 family.
   
 0.938
A0A0D0E9G0
Unplaced genomic scaffold scaffold_200, whole genome shotgun sequence; Belongs to the heat shock protein 70 family.
   
 0.919
A0A0D0E877
Unplaced genomic scaffold scaffold_77, whole genome shotgun sequence.
    
 0.866
A0A0D0E4V8
Unplaced genomic scaffold scaffold_36, whole genome shotgun sequence.
    
 
 0.863
A0A0D0DGJ7
Unplaced genomic scaffold scaffold_131, whole genome shotgun sequence; Belongs to the heat shock protein 70 family.
   
 0.857
A0A0D0DPM1
Unplaced genomic scaffold scaffold_322, whole genome shotgun sequence.
   
 0.857
A0A0D0DV69
Unplaced genomic scaffold scaffold_375, whole genome shotgun sequence.
   
 0.857
A0A0D0DW20
Unplaced genomic scaffold scaffold_323, whole genome shotgun sequence.
   
 0.857
A0A0D0DW25
Unplaced genomic scaffold scaffold_322, whole genome shotgun sequence.
   
 0.857
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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