STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DRG3Unplaced genomic scaffold scaffold_211, whole genome shotgun sequence. (310 aa)    
Predicted Functional Partners:
A0A0D0D398
Unplaced genomic scaffold scaffold_795, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
A0A0D0D3H6
Unplaced genomic scaffold scaffold_617, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
A0A0D0D5A2
Unplaced genomic scaffold scaffold_523, whole genome shotgun sequence.
  
 0.999
A0A0D0D7D4
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
A0A0D0DAS2
Unplaced genomic scaffold scaffold_299, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
A0A0D0DDP4
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.999
A0A0D0DH10
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
A0A0D0DHK2
Unplaced genomic scaffold scaffold_100, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.999
A0A0D0DIK2
Unplaced genomic scaffold scaffold_81, whole genome shotgun sequence.
   
 0.999
A0A0D0DKE6
Unplaced genomic scaffold scaffold_541, whole genome shotgun sequence.
   
 0.999
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.