STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DS79Autophagy-related protein. (123 aa)    
Predicted Functional Partners:
A0A0D0DC35
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
   
 0.999
A0A0D0DCQ4
Autophagy-related protein 3.
  
 0.999
A0A0D0E4V8
Unplaced genomic scaffold scaffold_36, whole genome shotgun sequence.
   
 0.999
A0A0D0CBI2
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy.
   
 0.997
A0A0D0E4H3
Unplaced genomic scaffold scaffold_183, whole genome shotgun sequence.
   
 0.996
A0A0D0D9I2
Unplaced genomic scaffold scaffold_341, whole genome shotgun sequence.
   
 0.990
A0A0D0D9U7
Unplaced genomic scaffold scaffold_4492, whole genome shotgun sequence.
   
 0.978
A0A0D0DJG1
Unplaced genomic scaffold scaffold_1824, whole genome shotgun sequence.
    
 0.962
A0A0D0DMX8
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
   
 0.962
A0A0D0DVH1
Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.
   
 0.962
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.