STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DTK1Unplaced genomic scaffold scaffold_512, whole genome shotgun sequence. (923 aa)    
Predicted Functional Partners:
A0A0D0DHG9
Unplaced genomic scaffold scaffold_103, whole genome shotgun sequence.
   
 0.999
A0A0D0DY09
Unplaced genomic scaffold scaffold_245, whole genome shotgun sequence.
   
 0.999
A0A0D0E1R7
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.999
A0A0D0E4I8
Unplaced genomic scaffold scaffold_42, whole genome shotgun sequence; Belongs to the DEAD box helicase family.
   
 0.999
A0A0D0EBA4
Unplaced genomic scaffold scaffold_121, whole genome shotgun sequence.
   
 0.997
A0A0D0E0Q8
Unplaced genomic scaffold scaffold_360, whole genome shotgun sequence.
   
 0.996
A0A0D0E7K5
Small nuclear ribonucleoprotein Sm D3.
   
 0.996
A0A0D0D9L8
Unplaced genomic scaffold scaffold_1193, whole genome shotgun sequence.
   
 0.995
A0A0D0DVI7
Unplaced genomic scaffold scaffold_356, whole genome shotgun sequence.
   
 0.995
A0A0D0E2Y1
Unplaced genomic scaffold scaffold_240, whole genome shotgun sequence.
   
 0.995
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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