STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DU45Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence. (312 aa)    
Predicted Functional Partners:
A0A0D0DUP5
Unplaced genomic scaffold scaffold_82, whole genome shotgun sequence.
    
 0.905
A0A0D0DPM5
Unplaced genomic scaffold scaffold_321, whole genome shotgun sequence.
    
 0.873
A0A0D0E5Z2
Unplaced genomic scaffold scaffold_404, whole genome shotgun sequence.
    
 0.822
A0A0D0DVB0
Unplaced genomic scaffold scaffold_368, whole genome shotgun sequence.
    
 0.787
A0A0D0D410
Unplaced genomic scaffold scaffold_588, whole genome shotgun sequence.
    
 0.784
A0A0D0DJA1
Unplaced genomic scaffold scaffold_598, whole genome shotgun sequence.
    
   0.677
A0A0D0DSF6
Unplaced genomic scaffold scaffold_168, whole genome shotgun sequence.
    
   0.677
A0A0D0E5X4
Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence.
    
   0.677
A0A0D0E9J0
Unplaced genomic scaffold scaffold_196, whole genome shotgun sequence.
    
   0.677
A0A0D0EB65
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
    
 0.659
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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