STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DUX3Unplaced genomic scaffold scaffold_75, whole genome shotgun sequence. (197 aa)    
Predicted Functional Partners:
A0A0D0EBL8
Unplaced genomic scaffold scaffold_96, whole genome shotgun sequence; Belongs to the BolA/IbaG family.
    
   0.562
A0A0D0ECN8
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence; Belongs to the BolA/IbaG family.
    
   0.562
A0A0D0EBR6
Unplaced genomic scaffold scaffold_85, whole genome shotgun sequence.
    
   0.556
A0A0D0ED77
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
      
 0.504
A0A0D0DWA8
Unplaced genomic scaffold scaffold_33, whole genome shotgun sequence.
      
 0.481
A0A0D0DVR3
Unplaced genomic scaffold scaffold_49, whole genome shotgun sequence; Belongs to the BolA/IbaG family.
    
   0.468
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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