STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DV68Beta-hexosaminidase. (562 aa)    
Predicted Functional Partners:
A0A0D0DJB8
Alpha-galactosidase.
   
 
 0.819
A0A0D0D3R7
Alpha-galactosidase.
   
 
 0.809
A0A0D0DJ87
Alpha-galactosidase.
   
 
 0.809
A0A0D0DY37
Unplaced genomic scaffold scaffold_8, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 18 family.
     
 0.809
A0A0D0ECA9
Unplaced genomic scaffold scaffold_49, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 18 family.
     
 0.809
A0A0D0DD67
Unplaced genomic scaffold scaffold_235, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 18 family.
     
 0.808
A0A0D0DN66
Unplaced genomic scaffold scaffold_1321, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 18 family.
     
 0.802
A0A0D0DZ28
Unplaced genomic scaffold scaffold_209, whole genome shotgun sequence.
     
 0.802
A0A0D0DF21
Unplaced genomic scaffold scaffold_176, whole genome shotgun sequence.
    
   0.729
A0A0D0DVV3
Unplaced genomic scaffold scaffold_336, whole genome shotgun sequence.
     
 0.712
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.