A0A0D0DVA1 protein (Paxillus rubicundulus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

A0A0D0DVA1

Unplaced genomic scaffold scaffold_64, whole genome shotgun sequence. (602 aa)

Predicted Functional Partners:

A0A0D0D981

0.996

A0A0D0DHK2

0.996

A0A0D0DWL5

0.996

A0A0D0E7G8

0.996

A0A0D0EA12

0.996

A0A0D0ECQ8

0.996

A0A0D0C5R5

0.995

A0A0D0CCP7

0.995

A0A0D0CY68

0.995

A0A0D0DB58

0.995

Your Current Organism:

Paxillus rubicundulus

NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D0C5R5	A0A0D0CCP7	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	0.999
A0A0D0C5R5	A0A0D0CY68	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
A0A0D0C5R5	A0A0D0D981	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_742, whole genome shotgun sequence.	0.999
A0A0D0C5R5	A0A0D0DB58	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
A0A0D0C5R5	A0A0D0DHK2	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_100, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A0D0C5R5	A0A0D0DVA1	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_64, whole genome shotgun sequence.	0.995
A0A0D0C5R5	A0A0D0DWL5	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS3 family.	0.999
A0A0D0C5R5	A0A0D0E7G8	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS4 family.	0.999
A0A0D0C5R5	A0A0D0EA12	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS17 family.	0.999
A0A0D0C5R5	A0A0D0ECQ8	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A0D0CCP7	A0A0D0C5R5	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_1769, whole genome shotgun sequence.	0.999
A0A0D0CCP7	A0A0D0CY68	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
A0A0D0CCP7	A0A0D0D981	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_742, whole genome shotgun sequence.	0.999
A0A0D0CCP7	A0A0D0DB58	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
A0A0D0CCP7	A0A0D0DHK2	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_100, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A0D0CCP7	A0A0D0DVA1	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_64, whole genome shotgun sequence.	0.995
A0A0D0CCP7	A0A0D0DWL5	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS3 family.	0.999
A0A0D0CCP7	A0A0D0E7G8	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS4 family.	0.999
A0A0D0CCP7	A0A0D0EA12	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS17 family.	0.999
A0A0D0CCP7	A0A0D0ECQ8	Unplaced genomic scaffold scaffold_1173, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family.	0.999