STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DW39Unplaced genomic scaffold scaffold_39, whole genome shotgun sequence. (156 aa)    
Predicted Functional Partners:
A0A0D0DVJ5
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.985
A0A0D0DGX3
Unplaced genomic scaffold scaffold_120, whole genome shotgun sequence.
   
 0.984
A0A0D0CH16
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.939
A0A0D0DQD9
Ubiquitin carboxyl-terminal hydrolase.
    
 0.757
A0A0D0CD16
Unplaced genomic scaffold scaffold_1147, whole genome shotgun sequence.
     
 0.746
A0A0D0E2B2
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 
 0.702
A0A0D0D9H6
Unplaced genomic scaffold scaffold_1204, whole genome shotgun sequence.
     
 0.685
A0A0D0EBT4
Unplaced genomic scaffold scaffold_81, whole genome shotgun sequence.
   
 
0.598
A0A0D0DMF4
Unplaced genomic scaffold scaffold_25, whole genome shotgun sequence.
     
 0.597
A0A0D0DXT1
Unplaced genomic scaffold scaffold_254, whole genome shotgun sequence.
     
 0.597
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.