STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DWD1Unplaced genomic scaffold scaffold_732, whole genome shotgun sequence; Belongs to the WD repeat SEC13 family. (333 aa)    
Predicted Functional Partners:
A0A0D0DTU0
Unplaced genomic scaffold scaffold_114, whole genome shotgun sequence.
    
 0.999
A0A0D0DWE8
Unplaced genomic scaffold scaffold_31, whole genome shotgun sequence; Belongs to the WD repeat SEC13 family.
    
0.999
A0A0D0DYG7
Unplaced genomic scaffold scaffold_539, whole genome shotgun sequence.
    
 0.999
A0A0D0E116
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.999
A0A0D0E5T7
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0A0D0DW54
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.997
A0A0D0DXW4
Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence.
    
 0.997
A0A0D0D2V5
Unplaced genomic scaffold scaffold_646, whole genome shotgun sequence.
    
 0.996
A0A0D0D8I3
Unplaced genomic scaffold scaffold_1302, whole genome shotgun sequence.
    
 0.996
A0A0D0DM44
Unplaced genomic scaffold scaffold_728, whole genome shotgun sequence.
   
 0.996
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.