STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DWS1Unplaced genomic scaffold scaffold_672, whole genome shotgun sequence. (192 aa)    
Predicted Functional Partners:
A0A0D0DQI8
Histidine biosynthesis trifunctional protein.
 
 
 0.989
A0A0D0DJN5
Unplaced genomic scaffold scaffold_1799, whole genome shotgun sequence.
 
 
 0.986
A0A0D0DKP9
Unplaced genomic scaffold scaffold_822, whole genome shotgun sequence; Belongs to the HisA/HisF family.
  
 
 0.973
A0A0D0D6V9
Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.
  
 
 0.972
A0A0D0E713
Tryptophan synthase.
  
  
 0.962
A0A0D0CJ62
Unplaced genomic scaffold scaffold_786, whole genome shotgun sequence.
 
  
 0.939
A0A0D0D2Z7
Unplaced genomic scaffold scaffold_640, whole genome shotgun sequence.
  
 
 0.902
A0A0D0D3X0
Unplaced genomic scaffold scaffold_3836, whole genome shotgun sequence.
  
 
 0.885
A0A0D0E4J3
Unplaced genomic scaffold scaffold_181, whole genome shotgun sequence.
  
 
 0.885
A0A0D0DTG4
Unplaced genomic scaffold scaffold_765, whole genome shotgun sequence.
  
 
 0.881
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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