STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DXD0Unplaced genomic scaffold scaffold_266, whole genome shotgun sequence. (301 aa)    
Predicted Functional Partners:
A0A0D0DQB8
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.999
A0A0D0DWW7
Unplaced genomic scaffold scaffold_286, whole genome shotgun sequence.
   
 0.999
A0A0D0E405
Unplaced genomic scaffold scaffold_515, whole genome shotgun sequence.
    
 0.999
A0A0D0E4Q0
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.999
A0A0D0EBX4
Unplaced genomic scaffold scaffold_73, whole genome shotgun sequence.
   
 0.999
A0A0D0DY76
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
   
 
 0.950
A0A0D0ECF6
Unplaced genomic scaffold scaffold_42, whole genome shotgun sequence.
   
 
 0.937
A0A0D0DQK3
Unplaced genomic scaffold scaffold_930, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL23 family.
   
 0.936
A0A0D0DDP4
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.931
A0A0D0E1B1
Unplaced genomic scaffold scaffold_314, whole genome shotgun sequence.
   
  0.927
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.