STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DXZ1Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence. (598 aa)    
Predicted Functional Partners:
A0A0D0E0T4
Unplaced genomic scaffold scaffold_129, whole genome shotgun sequence.
    
 0.936
A0A0D0E7S1
Unplaced genomic scaffold scaffold_296, whole genome shotgun sequence.
   
 0.831
A0A0D0DLS7
Unplaced genomic scaffold scaffold_33, whole genome shotgun sequence.
    
 0.821
A0A0D0DC98
Unplaced genomic scaffold scaffold_1817, whole genome shotgun sequence.
    
 0.785
A0A0D0DLK5
Unplaced genomic scaffold scaffold_36, whole genome shotgun sequence.
    
 0.785
A0A0D0DPZ4
Unplaced genomic scaffold scaffold_1020, whole genome shotgun sequence.
    
 0.785
A0A0D0E113
Unplaced genomic scaffold scaffold_121, whole genome shotgun sequence.
    
 0.785
A0A0D0E8D6
Unplaced genomic scaffold scaffold_72, whole genome shotgun sequence.
    
 0.734
A0A0D0DLY9
Unplaced genomic scaffold scaffold_456, whole genome shotgun sequence.
    
   0.728
A0A0D0DZG1
Unplaced genomic scaffold scaffold_456, whole genome shotgun sequence.
    
   0.728
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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