STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DY25Unplaced genomic scaffold scaffold_570, whole genome shotgun sequence. (311 aa)    
Predicted Functional Partners:
A0A0D0E8R4
Unplaced genomic scaffold scaffold_60, whole genome shotgun sequence.
    
 0.959
A0A0D0E4F7
Unplaced genomic scaffold scaffold_184, whole genome shotgun sequence.
    
 0.938
A0A0D0D8M5
Unplaced genomic scaffold scaffold_2493, whole genome shotgun sequence.
   
 0.820
A0A0D0E5T7
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 
 0.781
A0A0D0E4J8
Unplaced genomic scaffold scaffold_42, whole genome shotgun sequence.
   
 
 0.743
A0A0D0E822
Unplaced genomic scaffold scaffold_277, whole genome shotgun sequence.
    
   0.742
A0A0D0DRG5
Unplaced genomic scaffold scaffold_211, whole genome shotgun sequence.
    
 0.735
A0A0D0EAT6
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 
 0.716
A0A0D0E6Z0
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.710
A0A0D0DT61
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 
 0.700
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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