STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DYI6mRNA cap guanine-N7 methyltransferase. (477 aa)    
Predicted Functional Partners:
A0A0D0DI10
mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family.
   
 0.990
A0A0D0E2F2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.929
A0A0D0DTQ9
Unplaced genomic scaffold scaffold_498, whole genome shotgun sequence.
    
 0.922
A0A0D0EBA9
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.922
A0A0D0CXJ2
Unplaced genomic scaffold scaffold_6418, whole genome shotgun sequence.
    
 0.913
A0A0D0E2F0
Unplaced genomic scaffold scaffold_81, whole genome shotgun sequence.
   
 
 0.903
A0A0D0CT68
Unplaced genomic scaffold scaffold_1724, whole genome shotgun sequence.
    
 0.889
A0A0D0DQH8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.889
A0A0D0DMA1
Unplaced genomic scaffold scaffold_429, whole genome shotgun sequence.
    
 0.881
A0A0D0CY98
Unplaced genomic scaffold scaffold_2794, whole genome shotgun sequence.
   
 
 0.838
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.