STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DZL6Unplaced genomic scaffold scaffold_186, whole genome shotgun sequence. (883 aa)    
Predicted Functional Partners:
A0A0D0C4M7
Unplaced genomic scaffold scaffold_1897, whole genome shotgun sequence.
    
 
 0.942
A0A0D0DSM6
Unplaced genomic scaffold scaffold_160, whole genome shotgun sequence.
    
 0.844
A0A0D0D5X4
Unplaced genomic scaffold scaffold_487, whole genome shotgun sequence.
    
 
 0.817
A0A0D0EAD4
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.800
A0A0D0E719
Unplaced genomic scaffold scaffold_117, whole genome shotgun sequence.
    
 
 0.764
A0A0D0E9E6
AP-1 complex subunit gamma.
    
 
 0.764
A0A0D0E3P1
Unplaced genomic scaffold scaffold_213, whole genome shotgun sequence.
     
 0.761
A0A0D0DHH4
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 
 0.757
A0A0D0DZ86
Unplaced genomic scaffold scaffold_477, whole genome shotgun sequence.
    
 0.748
A0A0D0E0F0
Unplaced genomic scaffold scaffold_145, whole genome shotgun sequence; Belongs to the PI3/PI4-kinase family.
    
 0.744
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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