STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DZM5Unplaced genomic scaffold scaffold_185, whole genome shotgun sequence. (632 aa)    
Predicted Functional Partners:
A0A0D0E7S1
Unplaced genomic scaffold scaffold_296, whole genome shotgun sequence.
   
 0.925
A0A0D0DLS7
Unplaced genomic scaffold scaffold_33, whole genome shotgun sequence.
    
 0.903
A0A0D0E0T4
Unplaced genomic scaffold scaffold_129, whole genome shotgun sequence.
    
 0.784
A0A0D0DCP1
V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.744
A0A0D0DND2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.729
A0A0D0DU26
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
     
 0.666
A0A0D0E517
Unplaced genomic scaffold scaffold_32, whole genome shotgun sequence.
    
 0.665
A0A0D0E9S6
Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence.
    
 0.665
A0A0D0E0W1
Unplaced genomic scaffold scaffold_126, whole genome shotgun sequence.
     
 0.656
A0A0D0DR34
Unplaced genomic scaffold scaffold_875, whole genome shotgun sequence.
   
 
 0.652
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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