STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DZU6Unplaced genomic scaffold scaffold_174, whole genome shotgun sequence. (910 aa)    
Predicted Functional Partners:
A0A0D0E6U1
Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence.
   
 0.960
A0A0D0EA62
Unplaced genomic scaffold scaffold_22, whole genome shotgun sequence.
   
 0.934
A0A0D0ECR8
Unplaced genomic scaffold scaffold_26, whole genome shotgun sequence.
   
 0.931
A0A0D0DDZ4
Unplaced genomic scaffold scaffold_210, whole genome shotgun sequence.
   
 0.924
A0A0D0D3G7
Unplaced genomic scaffold scaffold_619, whole genome shotgun sequence.
   
 0.913
A0A0D0E5F3
Unplaced genomic scaffold scaffold_428, whole genome shotgun sequence.
   
 0.913
A0A0D0DF40
Unplaced genomic scaffold scaffold_175, whole genome shotgun sequence.
    
 0.909
A0A0D0DC35
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.907
A0A0D0E3I2
Unplaced genomic scaffold scaffold_220, whole genome shotgun sequence.
   
 0.907
A0A0D0DZH0
Unplaced genomic scaffold scaffold_452, whole genome shotgun sequence.
   
 0.904
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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