STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E079Unplaced genomic scaffold scaffold_394, whole genome shotgun sequence. (732 aa)    
Predicted Functional Partners:
A0A0D0E3W4
Tyrosine--tRNA ligase.
  
 
 0.955
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.941
A0A0D0EB73
Unplaced genomic scaffold scaffold_125, whole genome shotgun sequence.
   
 
 0.936
A0A0D0E8P7
Unplaced genomic scaffold scaffold_241, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.921
A0A0D0D4K3
Unplaced genomic scaffold scaffold_777, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.896
A0A0D0E7N3
Unplaced genomic scaffold scaffold_303, whole genome shotgun sequence.
  
 
 0.888
A0A0D0DYY9
Unplaced genomic scaffold scaffold_213, whole genome shotgun sequence.
  
 
 0.884
A0A0D0E3P4
Unplaced genomic scaffold scaffold_213, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.881
A0A0D0DV23
Unplaced genomic scaffold scaffold_382, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.871
A0A0D0DNW6
Unplaced genomic scaffold scaffold_6, whole genome shotgun sequence.
  
 
 0.853
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.