STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E0G2Unplaced genomic scaffold scaffold_143, whole genome shotgun sequence. (343 aa)    
Predicted Functional Partners:
A0A0D0D4I9
Unplaced genomic scaffold scaffold_3663, whole genome shotgun sequence.
    
 0.880
A0A0D0DVW8
Unplaced genomic scaffold scaffold_44, whole genome shotgun sequence.
    
 0.878
A0A0D0DNZ3
DNA polymerase.
   
 0.877
A0A0D0EA24
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.868
A0A0D0DXP9
Small nuclear ribonucleoprotein Sm D2.
    
 0.850
A0A0D0D8V6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.823
A0A0D0E3B2
Unplaced genomic scaffold scaffold_565, whole genome shotgun sequence.
    
 0.822
A0A0D0DN24
Unplaced genomic scaffold scaffold_16, whole genome shotgun sequence.
    
  0.811
A0A0D0ED25
Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence.
    
  0.811
A0A0D0DY50
Small nuclear ribonucleoprotein G.
    
  0.797
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.