STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E0Z6Unplaced genomic scaffold scaffold_122, whole genome shotgun sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (335 aa)    
Predicted Functional Partners:
A0A0D0E6N4
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
  
 
 0.940
A0A0D0DJD0
Malate synthase; Belongs to the malate synthase family.
   
 
 0.930
A0A0D0DYJ7
Isocitrate lyase.
  
 0.926
A0A0D0DSV4
Unplaced genomic scaffold scaffold_151, whole genome shotgun sequence.
  
 
 0.922
A0A0D0EB90
Isocitrate lyase.
  
 
 0.922
A0A0D0DQW0
Unplaced genomic scaffold scaffold_245, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL22 family.
 
      0.898
A0A0D0DLW7
Unplaced genomic scaffold scaffold_31, whole genome shotgun sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.892
A0A0D0D715
Unplaced genomic scaffold scaffold_429, whole genome shotgun sequence.
   
 
 0.888
A0A0D0E713
Tryptophan synthase.
  
 
 0.824
A0A0D0E0G6
Unplaced genomic scaffold scaffold_708, whole genome shotgun sequence; Belongs to the DapA family.
   
 
 0.735
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.