STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E113Unplaced genomic scaffold scaffold_121, whole genome shotgun sequence. (1352 aa)    
Predicted Functional Partners:
A0A0D0DJS4
Unplaced genomic scaffold scaffold_893, whole genome shotgun sequence.
   
 0.929
A0A0D0DN67
Unplaced genomic scaffold scaffold_14, whole genome shotgun sequence.
   
 0.925
A0A0D0DLK5
Unplaced genomic scaffold scaffold_36, whole genome shotgun sequence.
  
  
 
0.916
A0A0D0E4L3
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.
   
 0.910
A0A0D0DHZ4
Unplaced genomic scaffold scaffold_1038, whole genome shotgun sequence.
   
 0.906
A0A0D0DPW3
Unplaced genomic scaffold scaffold_1038, whole genome shotgun sequence.
   
 0.906
A0A0D0E338
Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence.
   
 0.906
A0A0D0DJ79
Unplaced genomic scaffold scaffold_602, whole genome shotgun sequence.
   
 
 0.903
A0A0D0DSU4
Unplaced genomic scaffold scaffold_152, whole genome shotgun sequence.
   
 0.902
A0A0D0E667
Unplaced genomic scaffold scaffold_385, whole genome shotgun sequence.
   
 0.902
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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