STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E165Unplaced genomic scaffold scaffold_323, whole genome shotgun sequence. (387 aa)    
Predicted Functional Partners:
A0A0D0D6Z5
Unplaced genomic scaffold scaffold_434, whole genome shotgun sequence.
    
 0.802
A0A0D0DN00
Unplaced genomic scaffold scaffold_765, whole genome shotgun sequence.
    
 0.802
A0A0D0DS65
Unplaced genomic scaffold scaffold_179, whole genome shotgun sequence.
    
 0.802
A0A0D0EAV9
Unplaced genomic scaffold scaffold_140, whole genome shotgun sequence.
    
 0.802
A0A0D0DNA7
Unplaced genomic scaffold scaffold_1294, whole genome shotgun sequence; Belongs to the AAA ATPase family.
    
 0.628
A0A0D0E3Q8
Unplaced genomic scaffold scaffold_211, whole genome shotgun sequence.
    
 0.563
A0A0D0CS73
Unplaced genomic scaffold scaffold_1841, whole genome shotgun sequence.
    
 0.540
A0A0D0DVE2
Unplaced genomic scaffold scaffold_60, whole genome shotgun sequence.
    
  0.532
A0A0D0CLK6
Unplaced genomic scaffold scaffold_766, whole genome shotgun sequence.
     
 0.530
A0A0D0EB99
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
     
 0.530
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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