STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E188Unplaced genomic scaffold scaffold_111, whole genome shotgun sequence. (701 aa)    
Predicted Functional Partners:
A0A0D0E5M6
Unplaced genomic scaffold scaffold_22, whole genome shotgun sequence.
   
 
 0.831
A0A0D0DCU8
Unplaced genomic scaffold scaffold_1755, whole genome shotgun sequence.
   
 
 0.827
A0A0D0E2F0
Unplaced genomic scaffold scaffold_81, whole genome shotgun sequence.
    
 
 0.780
A0A0D0DPK1
Unplaced genomic scaffold scaffold_1088, whole genome shotgun sequence.
    
   0.774
A0A0D0DYS7
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
 
 0.774
A0A0D0C9K6
Unplaced genomic scaffold scaffold_1423, whole genome shotgun sequence.
   
 
 0.763
A0A0D0CYA3
Unplaced genomic scaffold scaffold_2791, whole genome shotgun sequence.
   
 
 0.763
A0A0D0DFS5
Unplaced genomic scaffold scaffold_2539, whole genome shotgun sequence.
   
 
 0.763
A0A0D0DLE7
Unplaced genomic scaffold scaffold_491, whole genome shotgun sequence.
   
 
 0.763
A0A0D0DNK5
Unplaced genomic scaffold scaffold_363, whole genome shotgun sequence.
   
 
 0.763
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
Server load: low (24%) [HD]