STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E1B6Unplaced genomic scaffold scaffold_109, whole genome shotgun sequence. (317 aa)    
Predicted Functional Partners:
A0A0D0E0T4
Unplaced genomic scaffold scaffold_129, whole genome shotgun sequence.
    
 
 0.780
A0A0D0DLH2
Unplaced genomic scaffold scaffold_486, whole genome shotgun sequence; Belongs to the FPP/GGPP synthase family.
     
 0.655
A0A0D0DUE5
Unplaced genomic scaffold scaffold_437, whole genome shotgun sequence.
   
  
 0.571
A0A0D0DWT0
Unplaced genomic scaffold scaffold_25, whole genome shotgun sequence.
   
  
 0.508
A0A0D0D121
Unplaced genomic scaffold scaffold_2251, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
A0A0D0D3T5
Unplaced genomic scaffold scaffold_785, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
A0A0D0DB34
Unplaced genomic scaffold scaffold_1011, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
A0A0D0DGX4
Unplaced genomic scaffold scaffold_704, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
A0A0D0DJJ3
Unplaced genomic scaffold scaffold_1811, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
A0A0D0DT19
Unplaced genomic scaffold scaffold_553, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.