STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E1C1Unplaced genomic scaffold scaffold_312, whole genome shotgun sequence. (782 aa)    
Predicted Functional Partners:
A0A0D0D9I6
Unplaced genomic scaffold scaffold_1201, whole genome shotgun sequence.
     
 0.706
A0A0D0DWW6
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
     
 0.622
A0A0D0C9E4
Unplaced genomic scaffold scaffold_1444, whole genome shotgun sequence.
    
 0.619
A0A0D0CY39
Unplaced genomic scaffold scaffold_1185, whole genome shotgun sequence.
    
 0.619
A0A0D0D1X8
Unplaced genomic scaffold scaffold_690, whole genome shotgun sequence.
    
 0.619
A0A0D0D3D2
Unplaced genomic scaffold scaffold_627, whole genome shotgun sequence.
    
 0.619
A0A0D0DIQ1
Unplaced genomic scaffold scaffold_78, whole genome shotgun sequence.
    
 0.619
A0A0D0DMH1
Unplaced genomic scaffold scaffold_773, whole genome shotgun sequence.
    
 0.619
A0A0D0DPV9
Unplaced genomic scaffold scaffold_1039, whole genome shotgun sequence.
    
 0.619
A0A0D0DVI4
Unplaced genomic scaffold scaffold_56, whole genome shotgun sequence.
    
 0.619
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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