STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E1H6Unplaced genomic scaffold scaffold_103, whole genome shotgun sequence. (473 aa)    
Predicted Functional Partners:
A0A0D0DXN8
Unplaced genomic scaffold scaffold_14, whole genome shotgun sequence.
     
 0.739
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
     
 0.708
A0A0D0D494
Peptide hydrolase; Belongs to the peptidase M28 family.
     
 0.474
A0A0D0DMN1
Unplaced genomic scaffold scaffold_1376, whole genome shotgun sequence.
     
 0.474
A0A0D0DPY5
Peptide hydrolase; Belongs to the peptidase M28 family.
     
 0.474
A0A0D0E6C7
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
     
 0.474
A0A0D0EBN7
Protein BTN.
    
 
 0.473
A0A0D0DBY9
Unplaced genomic scaffold scaffold_936, whole genome shotgun sequence.
     
 0.449
A0A0D0E2L2
Unplaced genomic scaffold scaffold_610, whole genome shotgun sequence.
     
 0.449
A0A0D0E508
Unplaced genomic scaffold scaffold_457, whole genome shotgun sequence.
     
 0.449
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.