STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E232Unplaced genomic scaffold scaffold_90, whole genome shotgun sequence. (669 aa)    
Predicted Functional Partners:
A0A0D0EAT6
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
   
 
 0.777
A0A0D0DUW0
Unplaced genomic scaffold scaffold_400, whole genome shotgun sequence; Belongs to the complex I LYR family.
    
 
 0.759
A0A0D0DT61
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
   0.750
A0A0D0E5W8
Unplaced genomic scaffold scaffold_144, whole genome shotgun sequence.
    
 
 0.750
A0A0D0CVU9
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.748
A0A0D0CPY4
Unplaced genomic scaffold scaffold_5520, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.734
A0A0D0E394
Unplaced genomic scaffold scaffold_64, whole genome shotgun sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.734
A0A0D0D3U3
Unplaced genomic scaffold scaffold_1841, whole genome shotgun sequence.
    
   0.731
A0A0D0DCP6
Unplaced genomic scaffold scaffold_875, whole genome shotgun sequence.
    
   0.731
A0A0D0E1M1
Unplaced genomic scaffold scaffold_689, whole genome shotgun sequence.
    
   0.731
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.