STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E237Unplaced genomic scaffold scaffold_90, whole genome shotgun sequence. (1194 aa)    
Predicted Functional Partners:
A0A0D0DQR3
Unplaced genomic scaffold scaffold_254, whole genome shotgun sequence; Belongs to the eukaryotic initiation factor 4E family.
   
 0.999
A0A0D0CSL7
Unplaced genomic scaffold scaffold_735, whole genome shotgun sequence.
   
 0.996
A0A0D0DS91
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.989
A0A0D0DS55
Unplaced genomic scaffold scaffold_181, whole genome shotgun sequence.
   
 0.977
A0A0D0E7P5
Unplaced genomic scaffold scaffold_300, whole genome shotgun sequence.
   
 0.965
A0A0D0DUJ0
Unplaced genomic scaffold scaffold_89, whole genome shotgun sequence.
   
 0.954
A0A0D0E4B5
Unplaced genomic scaffold scaffold_497, whole genome shotgun sequence.
   
 0.954
A0A0D0DWK0
Nuclear cap-binding protein subunit 2.
    
 0.953
A0A0D0D3C5
Unplaced genomic scaffold scaffold_1910, whole genome shotgun sequence.
   
 0.951
HCR1
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.948
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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