STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E317Unplaced genomic scaffold scaffold_235, whole genome shotgun sequence. (139 aa)    
Predicted Functional Partners:
A0A0D0C9F0
Unplaced genomic scaffold scaffold_1442, whole genome shotgun sequence.
  
 
 0.904
A0A0D0D1R2
Unplaced genomic scaffold scaffold_2136, whole genome shotgun sequence.
  
 
 0.904
A0A0D0DIB2
Unplaced genomic scaffold scaffold_658, whole genome shotgun sequence.
  
 
 0.899
A0A0D0DS15
Unplaced genomic scaffold scaffold_187, whole genome shotgun sequence.
    
   0.889
A0A0D0E026
Unplaced genomic scaffold scaffold_162, whole genome shotgun sequence.
    
   0.889
A0A0D0D9I6
Unplaced genomic scaffold scaffold_1201, whole genome shotgun sequence.
     
 0.771
A0A0D0E1T4
Amine oxidase.
     
 0.756
A0A0D0EAJ0
Unplaced genomic scaffold scaffold_153, whole genome shotgun sequence.
    
   0.746
A0A0D0D886
Unplaced genomic scaffold scaffold_2597, whole genome shotgun sequence.
    
   0.713
A0A0D0DK28
Unplaced genomic scaffold scaffold_869, whole genome shotgun sequence.
   
 
 0.681
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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