STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E3Q0Unplaced genomic scaffold scaffold_56, whole genome shotgun sequence. (324 aa)    
Predicted Functional Partners:
A0A0D0DXM1
Unplaced genomic scaffold scaffold_259, whole genome shotgun sequence.
   
 0.975
A0A0D0E0C1
Unplaced genomic scaffold scaffold_150, whole genome shotgun sequence; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.975
A0A0D0DC87
Unplaced genomic scaffold scaffold_260, whole genome shotgun sequence.
    
 0.974
A0A0D0DPT9
Unplaced genomic scaffold scaffold_309, whole genome shotgun sequence.
    
 0.970
A0A0D0E8D3
Unplaced genomic scaffold scaffold_258, whole genome shotgun sequence.
   
 0.963
A0A0D0DAM2
Unplaced genomic scaffold scaffold_1068, whole genome shotgun sequence; Belongs to the synaptobrevin family.
    
 0.944
A0A0D0D833
Unplaced genomic scaffold scaffold_391, whole genome shotgun sequence; Belongs to the synaptobrevin family.
    
 0.939
A0A0D0DVA3
Unplaced genomic scaffold scaffold_64, whole genome shotgun sequence; Belongs to the synaptobrevin family.
    
 0.935
A0A0D0ED64
Unplaced genomic scaffold scaffold_9, whole genome shotgun sequence.
    
 0.934
A0A0D0E3Z4
Unplaced genomic scaffold scaffold_52, whole genome shotgun sequence; Belongs to the syntaxin family.
    
0.920
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.