STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E535Unplaced genomic scaffold scaffold_450, whole genome shotgun sequence. (115 aa)    
Predicted Functional Partners:
A0A0D0DZJ1
Unplaced genomic scaffold scaffold_189, whole genome shotgun sequence.
    
 0.890
A0A0D0ECT8
Unplaced genomic scaffold scaffold_24, whole genome shotgun sequence.
    
 0.890
A0A0D0DM04
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.844
A0A0D0DYD3
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence; Belongs to the protein kinase superfamily.
    
 0.838
A0A0D0BT78
Unplaced genomic scaffold scaffold_3851, whole genome shotgun sequence.
    
 0.779
A0A0D0DSM7
Unplaced genomic scaffold scaffold_160, whole genome shotgun sequence.
    
 0.779
A0A0D0DS30
Unplaced genomic scaffold scaffold_184, whole genome shotgun sequence.
    
 0.742
A0A0D0DVH4
Unplaced genomic scaffold scaffold_57, whole genome shotgun sequence.
    
 0.727
A0A0D0D679
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.690
A0A0D0DYD4
Unplaced genomic scaffold scaffold_546, whole genome shotgun sequence; Belongs to the cyclin family.
   
 0.688
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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