STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E547Unplaced genomic scaffold scaffold_30, whole genome shotgun sequence. (148 aa)    
Predicted Functional Partners:
A0A0D0DD07
Unplaced genomic scaffold scaffold_239, whole genome shotgun sequence.
  
  
 0.952
A0A0D0E9S8
Unplaced genomic scaffold scaffold_186, whole genome shotgun sequence.
   
 
 0.870
A0A0D0E8D8
Unplaced genomic scaffold scaffold_72, whole genome shotgun sequence.
   
 
 0.860
A0A0D0DHV5
Unplaced genomic scaffold scaffold_695, whole genome shotgun sequence; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.836
A0A0D0D0S1
Unplaced genomic scaffold scaffold_942, whole genome shotgun sequence.
   
 
 0.828
A0A0D0D408
Unplaced genomic scaffold scaffold_1809, whole genome shotgun sequence.
   
 
 0.828
A0A0D0DVD4
Unplaced genomic scaffold scaffold_364, whole genome shotgun sequence.
    
 
 0.821
A0A0D0DTD6
Unplaced genomic scaffold scaffold_131, whole genome shotgun sequence.
   
   0.813
A0A0D0DJY0
Unplaced genomic scaffold scaffold_879, whole genome shotgun sequence.
  
   0.810
A0A0D0E8J5
Unplaced genomic scaffold scaffold_250, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS7 family.
  
   0.810
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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