STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E5H2Unplaced genomic scaffold scaffold_25, whole genome shotgun sequence. (446 aa)    
Predicted Functional Partners:
A0A0D0DE12
Unplaced genomic scaffold scaffold_208, whole genome shotgun sequence; Belongs to the protein disulfide isomerase family.
    
   0.743
A0A0D0E6Z0
Unplaced genomic scaffold scaffold_2, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.733
A0A0D0E5U3
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
   0.728
A0A0D0DGQ4
Unplaced genomic scaffold scaffold_125, whole genome shotgun sequence.
  
 
0.694
A0A0D0EDC6
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
    
   0.609
A0A0D0CRC5
Unplaced genomic scaffold scaffold_739, whole genome shotgun sequence.
    
 0.593
A0A0D0DHL0
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence.
    
 0.593
A0A0D0DXH7
Unplaced genomic scaffold scaffold_15, whole genome shotgun sequence.
    
 0.593
A0A0D0D7L0
Unplaced genomic scaffold scaffold_1384, whole genome shotgun sequence.
    
 0.567
A0A0D0DLH0
Unplaced genomic scaffold scaffold_1529, whole genome shotgun sequence.
    
 
 0.543
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.