STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E5W8Unplaced genomic scaffold scaffold_144, whole genome shotgun sequence. (283 aa)    
Predicted Functional Partners:
A0A0D0EAT6
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
   
 
 0.984
A0A0D0D8M5
Unplaced genomic scaffold scaffold_2493, whole genome shotgun sequence.
    
 
 0.913
A0A0D0E6J3
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.886
A0A0D0E6D4
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
    
   0.883
A0A0D0E813
Unplaced genomic scaffold scaffold_279, whole genome shotgun sequence; Belongs to the complex I 49 kDa subunit family.
    
   0.883
A0A0D0E336
Unplaced genomic scaffold scaffold_68, whole genome shotgun sequence; Belongs to the complex I 30 kDa subunit family.
    
   0.848
A0A0D0D3U3
Unplaced genomic scaffold scaffold_1841, whole genome shotgun sequence.
   
 
 0.822
A0A0D0DCP6
Unplaced genomic scaffold scaffold_875, whole genome shotgun sequence.
   
 
 0.822
A0A0D0E1M1
Unplaced genomic scaffold scaffold_689, whole genome shotgun sequence.
   
 
 0.822
A0A0D0E352
Unplaced genomic scaffold scaffold_231, whole genome shotgun sequence.
   
 
 0.822
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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