STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E6C4Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence. (607 aa)    
Predicted Functional Partners:
A0A0D0DA63
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
 
    
 0.868
A0A0D0E499
Unplaced genomic scaffold scaffold_45, whole genome shotgun sequence; Belongs to the DEAD box helicase family.
    
 
 0.860
A0A0D0D7L5
Unplaced genomic scaffold scaffold_1383, whole genome shotgun sequence; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.776
A0A0D0DGW7
Unplaced genomic scaffold scaffold_121, whole genome shotgun sequence; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.776
A0A0D0DHX5
Unplaced genomic scaffold scaffold_687, whole genome shotgun sequence.
    
   0.728
A0A0D0DKS2
Unplaced genomic scaffold scaffold_817, whole genome shotgun sequence.
    
   0.728
A0A0D0DLJ3
Unplaced genomic scaffold scaffold_36, whole genome shotgun sequence.
    
   0.728
A0A0D0DLT8
Unplaced genomic scaffold scaffold_466, whole genome shotgun sequence.
    
   0.728
A0A0D0DLZ4
Unplaced genomic scaffold scaffold_454, whole genome shotgun sequence.
    
   0.728
A0A0D0DP05
Unplaced genomic scaffold scaffold_345, whole genome shotgun sequence.
    
   0.728
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
Server load: low (12%) [HD]