STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E6U8Unplaced genomic scaffold scaffold_357, whole genome shotgun sequence. (299 aa)    
Predicted Functional Partners:
A0A0D0EAC5
Unplaced genomic scaffold scaffold_162, whole genome shotgun sequence.
    
   0.721
A0A0D0DDP4
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
  0.684
A0A0D0DRR4
Unplaced genomic scaffold scaffold_682, whole genome shotgun sequence; Belongs to the helicase family. Dicer subfamily.
    
 
 0.684
A0A0D0DVY2
Unplaced genomic scaffold scaffold_43, whole genome shotgun sequence.
    
 
 0.684
A0A0D0DWI2
Unplaced genomic scaffold scaffold_29, whole genome shotgun sequence; Belongs to the helicase family. Dicer subfamily.
    
 
 0.684
A0A0D0E965
Unplaced genomic scaffold scaffold_218, whole genome shotgun sequence; Belongs to the helicase family. Dicer subfamily.
    
 
 0.684
A0A0D0ED96
Unplaced genomic scaffold scaffold_5, whole genome shotgun sequence.
     
 0.675
A0A0D0E640
Unplaced genomic scaffold scaffold_391, whole genome shotgun sequence; Belongs to the eukaryotic ribosomal protein eL38 family.
     
 0.673
A0A0D0E0P7
Unplaced genomic scaffold scaffold_133, whole genome shotgun sequence.
    
 0.670
A0A0D0DS52
Unplaced genomic scaffold scaffold_181, whole genome shotgun sequence.
   
 
  0.665
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.