STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E784Unplaced genomic scaffold scaffold_112, whole genome shotgun sequence. (883 aa)    
Predicted Functional Partners:
A0A0D0DUH5
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.906
A0A0D0DCZ9
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 0.901
A0A0D0DV77
Unplaced genomic scaffold scaffold_66, whole genome shotgun sequence.
  
 
 0.847
A0A0D0D4A3
Acetolactate synthase.
  
 
 0.778
A0A0D0C9L1
Unplaced genomic scaffold scaffold_1422, whole genome shotgun sequence.
  
 0.776
A0A0D0CKC1
Unplaced genomic scaffold scaffold_777, whole genome shotgun sequence.
  
 0.776
A0A0D0DU69
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
  
 0.757
A0A0D0D3I9
Citrate synthase; Belongs to the citrate synthase family.
  
 0.745
A0A0D0DSZ1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.745
A0A0D0E069
Unplaced genomic scaffold scaffold_156, whole genome shotgun sequence; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.741
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.