STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E7K4Unplaced genomic scaffold scaffold_308, whole genome shotgun sequence. (343 aa)    
Predicted Functional Partners:
A0A0D0D6Z3
Unplaced genomic scaffold scaffold_434, whole genome shotgun sequence.
    
 
 0.993
A0A0D0E6E5
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
   
 
 0.990
A0A0D0DIY8
Unplaced genomic scaffold scaffold_75, whole genome shotgun sequence.
   
 
 0.988
A0A0D0EBA4
Unplaced genomic scaffold scaffold_121, whole genome shotgun sequence.
   
 
 0.987
A0A0D0E2E4
Unplaced genomic scaffold scaffold_265, whole genome shotgun sequence.
    
 0.984
A0A0D0EC67
Unplaced genomic scaffold scaffold_57, whole genome shotgun sequence.
    
 0.981
A0A0D0E3R6
Unplaced genomic scaffold scaffold_210, whole genome shotgun sequence.
    
 0.979
A0A0D0E9A6
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.979
A0A0D0DTU2
Unplaced genomic scaffold scaffold_486, whole genome shotgun sequence.
    
 
 0.961
A0A0D0E7L3
Unplaced genomic scaffold scaffold_99, whole genome shotgun sequence.
   
 
 0.950
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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