STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E7S8Unplaced genomic scaffold scaffold_93, whole genome shotgun sequence. (433 aa)    
Predicted Functional Partners:
A0A0D0DNR3
Unplaced genomic scaffold scaffold_356, whole genome shotgun sequence.
    
 0.874
A0A0D0DZ85
Unplaced genomic scaffold scaffold_200, whole genome shotgun sequence.
    
 0.874
A0A0D0E485
Unplaced genomic scaffold scaffold_46, whole genome shotgun sequence.
    
 0.874
A0A0D0ED27
Unplaced genomic scaffold scaffold_13, whole genome shotgun sequence.
    
 0.874
A0A0D0ED79
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
    
 0.874
A0A0D0DNV5
Unplaced genomic scaffold scaffold_351, whole genome shotgun sequence; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.809
A0A0D0E0R0
Unplaced genomic scaffold scaffold_359, whole genome shotgun sequence; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.809
A0A0D0DZV8
Unplaced genomic scaffold scaffold_172, whole genome shotgun sequence; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.785
A0A0D0DAK0
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
 0.781
A0A0D0CUN0
Unplaced genomic scaffold scaffold_3719, whole genome shotgun sequence.
    
 0.764
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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