STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0E964Unplaced genomic scaffold scaffold_219, whole genome shotgun sequence. (668 aa)    
Predicted Functional Partners:
A0A0D0DLM2
Unplaced genomic scaffold scaffold_1510, whole genome shotgun sequence.
   
 0.995
A0A0D0DL52
Unplaced genomic scaffold scaffold_1582, whole genome shotgun sequence.
    
 
 0.989
A0A0D0DVI8
Unplaced genomic scaffold scaffold_56, whole genome shotgun sequence.
    
 
 0.989
A0A0D0CGR9
Unplaced genomic scaffold scaffold_4032, whole genome shotgun sequence.
   
 
 0.968
A0A0D0EA78
Unplaced genomic scaffold scaffold_167, whole genome shotgun sequence.
    
 
 0.953
A0A0D0E8M2
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.947
A0A0D0DHT5
Unplaced genomic scaffold scaffold_96, whole genome shotgun sequence; Belongs to the heat shock protein 70 family.
  
 
 0.933
A0A0D0E0Z4
Unplaced genomic scaffold scaffold_123, whole genome shotgun sequence.
  
 
 0.846
A0A0D0EBA4
Unplaced genomic scaffold scaffold_121, whole genome shotgun sequence.
     
0.823
A0A0D0BWN4
Unplaced genomic scaffold scaffold_3091, whole genome shotgun sequence.
    
 
 0.818
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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