STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0EAM3Unplaced genomic scaffold scaffold_11, whole genome shotgun sequence. (452 aa)    
Predicted Functional Partners:
A0A0D0CY68
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.999
A0A0D0DFF1
Unplaced genomic scaffold scaffold_166, whole genome shotgun sequence.
   
 0.999
A0A0D0DHK2
Unplaced genomic scaffold scaffold_100, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
A0A0D0DXX9
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
A0A0D0E0E5
Unplaced genomic scaffold scaffold_380, whole genome shotgun sequence.
   
 0.999
A0A0D0E747
Unplaced genomic scaffold scaffold_1, whole genome shotgun sequence.
   
 0.999
A0A0D0E7G8
Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
A0A0D0D9H4
Unplaced genomic scaffold scaffold_341, whole genome shotgun sequence.
   
 0.998
A0A0D0DPN0
Unplaced genomic scaffold scaffold_1078, whole genome shotgun sequence.
   
 
 0.998
A0A0D0DS96
Unplaced genomic scaffold scaffold_175, whole genome shotgun sequence.
   
 0.998
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.