STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0EB20Sulfhydryl oxidase. (223 aa)    
Predicted Functional Partners:
A0A0D0DW14
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.
    
 0.927
A0A0D0E9D6
Unplaced genomic scaffold scaffold_41, whole genome shotgun sequence.
    
 0.927
A0A0D0E145
Unplaced genomic scaffold scaffold_117, whole genome shotgun sequence.
    
 0.918
A0A0D0EAZ2
Proteasome subunit beta.
 
 
    0.895
A0A0D0EDC4
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
 
      0.790
A0A0D0DQF2
Unplaced genomic scaffold scaffold_274, whole genome shotgun sequence.
   
 0.741
A0A0D0EBI1
Unplaced genomic scaffold scaffold_104, whole genome shotgun sequence.
   
 0.655
A0A0D0CZA6
Unplaced genomic scaffold scaffold_1069, whole genome shotgun sequence; Belongs to the small Tim family.
   
 
 0.642
A0A0D0E3J7
Unplaced genomic scaffold scaffold_58, whole genome shotgun sequence; Belongs to the small Tim family.
   
 0.596
A0A0D0CG00
Unplaced genomic scaffold scaffold_928, whole genome shotgun sequence.
    
   0.570
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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