STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0EBG1Unplaced genomic scaffold scaffold_108, whole genome shotgun sequence. (611 aa)    
Predicted Functional Partners:
A0A0D0DWT8
Unplaced genomic scaffold scaffold_288, whole genome shotgun sequence.
    
 0.807
A0A0D0DA73
Unplaced genomic scaffold scaffold_315, whole genome shotgun sequence.
    
 
 0.787
A0A0D0E9Y1
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
    
 
 0.763
A0A0D0DHY1
Unplaced genomic scaffold scaffold_1041, whole genome shotgun sequence.
    
 
 0.759
A0A0D0DRI0
Unplaced genomic scaffold scaffold_208, whole genome shotgun sequence.
    
 
 0.752
A0A0D0EA42
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 
 0.750
A0A0D0EAZ9
Unplaced genomic scaffold scaffold_3, whole genome shotgun sequence.
   
   0.748
A0A0D0DVD3
Trafficking protein particle complex subunit BET3.
    
 
 0.746
A0A0D0BWM4
Unplaced genomic scaffold scaffold_3097, whole genome shotgun sequence.
    
 
 0.741
A0A0D0E7Z4
Unplaced genomic scaffold scaffold_84, whole genome shotgun sequence.
    
   0.730
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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