STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0EBI3SAGA-associated factor 11. (343 aa)    
Predicted Functional Partners:
A0A0D0E928
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.988
A0A0D0DJ48
Unplaced genomic scaffold scaffold_72, whole genome shotgun sequence.
    
 
 0.772
A0A0D0E9R6
Unplaced genomic scaffold scaffold_188, whole genome shotgun sequence.
    
 
 0.772
A0A0D0ECF0
Unplaced genomic scaffold scaffold_43, whole genome shotgun sequence.
    
 
 0.709
A0A0D0E8G3
Unplaced genomic scaffold scaffold_69, whole genome shotgun sequence.
     
 0.492
A0A0D0E4Z5
Unplaced genomic scaffold scaffold_459, whole genome shotgun sequence.
     
 0.433
A0A0D0DJY4
Unplaced genomic scaffold scaffold_58, whole genome shotgun sequence.
    
 
 0.430
A0A0D0DPT4
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 
 0.420
MDM34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.
   
 
 0.410
A0A0D0E9B5
Unplaced genomic scaffold scaffold_209, whole genome shotgun sequence; Belongs to the protein kinase superfamily.
   
 
 0.410
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.